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Molecular modeling has gone through a extraordinary transformation within the final two decades. This e-book offers thorough introductions and a compilation of step by step tools acceptable to difficulties confronted by way of non-specialists – in particular these new to the software program applications utilized in molecular modeling. pointers on troubleshooting and warding off universal pitfalls are integrated within the booklet, in addition to chapters overlaying quite a lot of matters. hyperlinks to downloadable software program also are provided.

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M. and Valleau, J. P. , (1977), Monte Carlo examine of section isolating liquid combination by means of umbrella sampling, J. Chem. Phys. , sixty six, 1402–1408. 14. Gao, J. , Kuczera, ok. , Tidor, B. and Karplus, M. , (1989), Hidden thermodynamics of mutant proteins: A molecular dynamics research, technology, 244, 1069–1072. 15. Pearlman, D. A. , (1994), loose strength derivatives: a brand new procedure for probing the convergence challenge in loose strength calculations, J. Comput. Chem. , 15, 105–124. sixteen. Beutler, T. C. , Mark, A. E. , van Schaik, R. C. , Gerber, P. R. and van Gunsteren, W. F. , (1994), keeping off singularities and neumerical instabilities in loose power calculations in line with molecular simulations, Chem. Phys. Lett. , 222, 529–539. 142 C. Chipot 17. Straatsma, T. P. and Berendsen, H. J. C. , (1988), loose power of ionic hydration: research of a thermodynamic integration strategy to review loose power alterations by means of molecular dynamics simulations, J. Chem. Phys. , 89, 5876–5886. 18. Chandler, D. , creation to fashionable statistical mechanics, Oxford college Press, 1987. 19. Kumar, S. , Bouzida, D. , Swendsen, R. H. , Kollman, P. A. and Rosenberg, J. M. , (1992), The weighted histogram research process at no cost strength calculations on biomolecules. I. the strategy, J. Comput. Chem. , thirteen, 1011–1021. 20. Pearlman, D. A. , (1993), identifying the contributions of constraints in unfastened strength calculations: improvement, characterization, and proposals, J. Chem. Phys. , ninety eight, 8946–8957. 21. Carter, E, A. , Cicotti, G. , Hynes, J. T. and Kapral, R. , (1989), restricted response coordinate dynamics for the simulation of infrequent occasions, Chem. Phys. Lett. , 156, 472–477. 22. den Otter, W. ok. and Briels, W. J. , (1998), The calculation of free–energy changes by way of restricted molecular dynamics simulations, J. Chem. Phys. , 109, 4139–4146. 23. den Otter, W. okay. , (2000), Thermodynamic integration of the unfastened power alongside a response coordinate in Cartesian coordinates, J. Chem. Phys. , 112, 7283–7292. 24. Darve, E. and Pohorille, A. , (2001), Calculating unfastened energies utilizing regular strength, J. Chem. Phys. , one hundred fifteen, 9169–9183. 25. H´enin, J. and Chipot, C. , (2004), Overcoming loose power boundaries utilizing unconstrained molecular dynamics simulations, J. Chem. Phys. , 121, 2904–2914. 26. Pearlman, D. A. and Kollman, P. A. , (1991), The missed bond–stretching contribution in loose strength perturbation calculations, J. Chem. Phys. , ninety four, 4532–4545. 27. Jorgensen, W. L. and Ravimohan, C. , (1985), Monte Carlo simulation of variations in loose energies of hydration, J. Chem. Phys. , eighty three, 3050–3054. 28. Chipot, C. , Kollman, P. A. and Pearlman, D. A. , (1996), replacement ways to strength of suggest strength calculations: loose power perturbation as opposed to thermodynamic integration. Case research of a few consultant nonpolar interactions, J. Comput. Chem. , 17, 1112–1131. 29. Widom, B. , (1963), a few subject matters within the thought of fluids, J. Chem. Phys. , 39, 2808–2812. 30. Straatsma, T. P. , Berendsen, H. J. C. and Stam, A. J. , (1986), Estimation of statistical error in molecular simulation calculations, Mol. Phys. , fifty seven, 89–95. 31. Chipot, C. and Pohorille, A.

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